rs233154037 SNP Detail

Summary

• ID
  rs233154037
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24660821 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCATTTAA ACACCTCACT
  GCTTCGAAGG CGGATCGATG GCCAGTCATG CGCCTTCACG TACTTGCAAT CGGCATTAAA
  GTCACCCAGA AACAGCATGT CCTGTAGGCA AGCACAGCCA GTACATCTTA GCAGTGCTCA
  GTAGTCCAGA CCTCTGAGAA CACTTGTGGT CTGGGACGTG AGTTGGGGGC GGGGGGGGGG
  R
  TGTTGCCTAC ATCAGTGTTC CACTTGTCAA TGACATCAAG GTACACATCG TAGAGCGCGT
  CGATCTCTGC CACCGCCTGG TGTGGTGCTG CATGGAGGGG GATCAGCACC AGCTCCTTGG
  TGGCTGTGGA AGGTGGGGGG ATATGAGGGT CAAGGGAAGC CTGGAAGAGG TAGGCTTGTC
  TGGGAGAGGG CAGTATCAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325331717	CHEV_17_24578792	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233154037					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24660821 () rs orientation: forward

Symbol	Name	Function Class
Dnase1l2	deoxyribonuclease 1-like 2	within coordinates
E4f1	E4F transcription factor 1	1931 bp downstream
Rr329769	regulatory region 329769	221 bp distal
Rr337043	regulatory region 337043	1918 bp distal
Rr340710	regulatory region 340710	within coordinates
Tssr146730	transcription start site region 146730	1448 bp upstream
Tssr146731	transcription start site region 146731	310 bp downstream
Tssr146732	transcription start site region 146732	1230 bp downstream
Tssr146733	transcription start site region 146733	1246 bp downstream