rs233243044 SNP Detail

Summary

• ID
  rs233243044
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:133628587 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAGGCAAGA AAGCAGGAGA TAATTCTTAg
  gctggagata tggctcagtg gttaagggca cctgctactc ccagcaccca tgaggaggct
  caaaaccatc tgtaagttca gtttcagggg agtcaaacac atcttctgga ctccctgggc
  W
  ccaggcagga ggtacacaga cacacataca ggcaaaacac tcatgcatat gaaaaccaac
  caaccaacca accaaccaaA AATCTAACTg ctggggagac agctcagcag ttagagcact
  ggctgctctt tcagaggatc tgggctcaat                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319980792	CHEV_1_135597426	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233243044					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:133628587 () rs orientation: forward

Symbol	Name	Function Class
Atp2b4	ATPase, Ca++ transporting, plasma membrane 4	1829 bp downstream