rs233251545 SNP Detail

Summary

• ID
  rs233251545
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:144557407 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gtgtaaaac cataccccac ttgtctgggt
  ggtcctgaga ttaaatacct tctgcaggga ggaagctgca agggaggctg cttggaggac
  cctgggtagg tcattagaac tctgctttga acctacttga ctgtggtcaa gtctcttcct
  W
  ttgttttggt ctgaggtgtt aggggtgtgt ctcatctaca tgtgtaaggg cttggggagt
  tgcccttatg tgactgatag ccacaagtct atgggggcag ggctggtgcc aggagtagca
  aaattcctat agtcccttca gggtctcagg                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320537064	CHEV_2_144541223	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233251545					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:144557407 () rs orientation: forward

Symbol	Name	Function Class
Dtd1	D-tyrosyl-tRNA deacylase 1	within coordinates
Rr46878	regulatory region 46878	394 bp proximal
Rr374001	regulatory region 374001	within coordinates
Tssr20549	transcription start site region 20549	693 bp downstream
Tssr20550	transcription start site region 20550	628 bp downstream
Tssr26613	transcription start site region 26613	925 bp upstream