rs233252906 SNP Detail

Summary

• ID
  rs233252906
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:135870727 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGTGTGTGA CCGTGAGTTA
  GTGTACATGC ATGCCAGGGT GTGCATGTGG AGGGCAGAAA ATAACTTCTG GGAATTAATT
  TTCTCCTTCT ACCGTGTGGT GGTTACAGAT TGGACTGACG TCATCCGACT TGGCAGCAAG
  TGCCTTTACC CACTGATTCA TCTTGGTGAC CCATGGGGGA AAACCATTTT CTTTAGTGGA
  W
  GAGCCATTGT TAAGTTATTC TGCAAATAAC TCTCTCTTGG TCCTGTGTGA ACCTTAATAA
  AACACATTGG GTCAAAAAAA GAAAAAAAAA AAAGACATCA GATTCTGGCG AGATGGCTCC
  TCAGTTAAGA GCCATAACTG CTCTGCAGAC CAGAGGTCAG TTGCCAGCTT CCTTGTTGCA
  CTGCCCACAA CTGTCTGGAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321697851	CHEV_5_136317743	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233252906					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:135870727 () rs orientation: forward

Symbol	Name	Function Class
Rr622447	regulatory region 622447	1641 bp proximal
Srrm3	serine/arginine repetitive matrix 3	within coordinates
Srrm3os	serine/arginine repetitive matrix 3, opposite strand	1184 bp downstream