rs233335638 SNP Detail

Summary

• ID
  rs233335638
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:61927864 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTTACAGC TGTGTTGAAC
  AGCAGCACCT TCTAGCTCCT GTGAAACTCC TCAGAGGCAA GTTGCAGCCA TCCACACCTC
  CGTAGCCTGT GTGTGTACCT CAGTGCCTAC AGTCTGCCAT GGGCGATTGT CTCTGGTGCA
  GCTGACCAGT CTCCCTGTCT CAATAAATCT GCTTAAAACT GTTTGTAGCA ACAAAGTTAT
  R
  AAGTGCAGCC ATTGCTGTAG CTGTTTTTTT CTTTTCTTTT CTTTTCTTTT CTTTTCTTTT
  CTTTTCTTTT CTTTTCTTTC TTTTTTAATA GTAAAAGAGC GCTCTGCTCT TATTTGTCTG
  GCCTGGTCAT GCCAGGCTGT GTGAGCACCC TCATAGGGCG GGTGGGAGGT CTCATCATTG
  GAGGCCCCGG GCATCATGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325645785	CHEV_18_61954447	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233335638					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:61927864 () rs orientation: forward

Symbol	Name	Function Class
Gm35919	predicted gene, 35919	60 bp downstream
Rr346544	regulatory region 346544	1664 bp distal
Rr346545	regulatory region 346545	464 bp distal
Rr351728	regulatory region 351728	1719 bp distal
Rr356351	regulatory region 356351	656 bp distal