rs233376493 SNP Detail

Summary

• ID
  rs233376493
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:55479095 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aagctgcaa gttgaggttc agggtttgca
  ttaggAGCTG TGGTTGTTGT TCTCCATGCT GTGTATGttt actgtgtgca tagcctttcc
  ttttccagaa tgatacagct gcagtcacgt ccatagattt tcatactagc ttctctcatt
  Y
  agcaatatgc atttgtcgtt gtcttttgta gcatacgagt tcatttcttt taaatcattg
  gctagattat atagctgcac gcatagagtc cgttatatac atgcactaca tcgtttctac
  atttatctat tgtaagatat cttgattatt                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319728604	CHEV_1_55496780	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233376493					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:55479095 () rs orientation: forward

Symbol	Name	Function Class
Gm38056	predicted gene, 38056	968 bp upstream
Plcl1	phospholipase C-like 1	within coordinates