rs233381535 SNP Detail

Summary

• ID
  rs233381535
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:56498821 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCTTGATC GAAAGTAAGG
  CCATGTAGGG TCGAGAGTGG GGCTTGACTT CATGTCCCCC GATGATCTCC CCTGAAGGGA
  AAGCCAATCA TTTTGTGGGC ACCTGCTAGA TCACCAGATG GGTTTTGTCT GGTAGCTCCA
  GACTTGCTAG GCATTTGGGA GCCAGGGAGT CCTGGAGTTG GAAGGAGGTT GGGAGGAGTG
  M
  CCTCATTTTC CCCTTCTTTA AAAGGAGAGA AATATAGGTC TTGGCTTATC AATCTTCCTT
  CCACACAGTT GGAGGCAAAC ATAATTCTCT GGACAAGGAA ATCCTAAGGA TTCAGCTTGT
  CTGTCTTCTG ACTTCTGGTC CCAGAGTTTC TAAGACCTTC TCTCCCTTGC TCCCAGCCCT
  GTGATGCCTG GAATACTGCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324645029	CHEV_14_56880201	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233381535					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:56498821 () rs orientation: forward

Symbol	Name	Function Class
Gzmb	granzyme B	within coordinates
Rr295614	regulatory region 295614	805 bp proximal
Tssr128924	transcription start site region 128924	808 bp downstream
Tssr128925	transcription start site region 128925	853 bp downstream
Tssr128926	transcription start site region 128926	869 bp downstream