rs233428776 SNP Detail

Summary

• ID
  rs233428776
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:69999644 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCAGGAAAA CCCTTCCCCA
  TCTTTCTTTA CCATACAAAA GATAGCTTTC CCCTAAACCA ATACAGTCAA CAAACTTTTA
  AAAACCGGGG TCCTATTACA AACCAACGCC CAGCACTAAC TGCTTTAAAA TTACTGCATA
  ATTAGATTTA GTTGAATTTC ACCATTAATT AGGCAGCCGC ACTGCGGGGA GCCTTTGAAA
  W
  CCGAGAAAAT GGGAAAAATC ATCTGAAGCA CGTTTTTTAA AACCCAACTT CAATAAATCT
  TGACGGGGCC TGGAATTCAG AGTACCTCAC TCCCCACCCA GGTGGTTGAT AGGGTTTCCC
  AGGCTCGGGC TAGGTTTGGA ACTGGACAGG GACGATGATC TCCCCCATCT AACTAGAGAT
  GATGGGTCCC CATCTCTGAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322251017	CHEV_7_77494782	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233428776					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:69999644 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19248	CpG island 19248	1937 bp distal
Cpgi19249	CpG island 19249	1179 bp distal
Cpgi19250	CpG island 19250	952 bp proximal
Rr648637	regulatory region 648637	1710 bp distal
Rr648638	regulatory region 648638	594 bp distal
Rr648639	regulatory region 648639	407 bp proximal