rs233428953 SNP Detail

Summary

• ID
  rs233428953
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:100182218 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACGTGCCT GTCTGAGGCT
  GAGCTAAACA GTTAAGTTGG GGAAAATAAA AGCGGTCAGG CTTGATTCTG CTATCTTGAA
  CACAAATATC TTGGCGTCAC GGACACACAA GCACCATCTG CCTGTAGGTG TGCCGATGGT
  GGGAGCCACT CTATCTGATG CAAAATTGAG CACCGTCAGC TGTTTGACAG ACAAAACACT
  Y
  CGCGCAGTGC TTCCCACTGG CTGTTGTGCA CACCGCCATG GCTTTAGCTG CTCCACAATA
  ATCCCCAAAC TCTGAATTTG CAACACCCCA GGGTATTTCT AGTCACTATA AGGGATTTTG
  AAAGAGTCTT AAAATTTCTC AAAAACAAAT TAGTGTCAGT GAACTTTAAG AAGTAAAGAG
  GCTCTACACC AGGCCTTCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323141709	CHEV_9_100200584	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233428953					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:100182218 () rs orientation: forward

Symbol	Name	Function Class
Gm28167	predicted gene 28167	within coordinates
Rr685479	regulatory region 685479	1452 bp proximal
Rr685480	regulatory region 685480	1578 bp proximal