rs233433425 SNP Detail

Summary

• ID
  rs233433425
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:99663556 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTCACACAT TTGAACAAGC
  TTATTGGGAC CAGGATGGAA TGTGGTGGTT AGAATATGCT TGGCCCAAGG AGTAACACTA
  TTAGGAGGTG AGCTTTGAGA CCTGTTCCTA GCTGCCTGAG GACAATCTGC TCCTGGCTTC
  CTATGGATGA CATATAGAAC TCTCACTTCC TCCTGCACCA TGCCTGCCTG GACACTGCCA
  Y
  GCATTGATAA TTATGGACTG AACCTTTGAA CCTGTAAGCC AGCCTCCAAT TAAATGTTGT
  CCTTATAAGA GTTGCCTGGG TCATGGCTTC TCTTCATAGC AATGAAAACC CTAAAACAAC
  AATATAGAGT TGTCTGCAGA ATATCAGCAT CTACTGTGCA GAAAAGGCTG TGGAGAGAAG
  CTTCTGTAGA GTAAGCAGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325081759	CHEV_15_99596106	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233433425					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:99663556 () rs orientation: forward

Symbol	Name	Function Class
Cers5	ceramide synthase 5	within coordinates
Gm17058	predicted gene 17058	316 bp upstream