rs233444135 SNP Detail

Summary

• ID
  rs233444135
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4031926 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTA AATCTAACGC CTGCACACAC
  M
  CCCCCACCCC ACGCCCCTTG CCTTT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323873066	CHEV_12_3981926	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233444135					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4031926 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4371	CpG island 4371	within coordinates
Efr3b	EFR3 homolog B	within coordinates
Gm59670	predicted gene, 59670	within coordinates
Rr256319	regulatory region 256319	1675 bp proximal
Rr265366	regulatory region 265366	within coordinates
Rr267337	regulatory region 267337	1122 bp proximal
Rr369491	regulatory region 369491	464 bp upstream
Rr403219	regulatory region 403219	260 bp downstream