rs233512724 SNP Detail

Summary

• ID
  rs233512724
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:44478186 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGAACTGAG GGGCAGTTGA ACGTGTTCTT
  AGCGAGTCAC CTGCTGACCG TGCAAATGAA AAATATCTCC TTTGACTCTG GGCCTCCTGT
  AATAAAGCAA AGATAGAGCC TGAGACAGTA CCCAGGGCTA GGAGCCAGAG ACACAGAGAA
  Y
  TTAAATTCAA GGCTGGTCTG ACCCTGTCTG AAAACAAAAC AAAACAACAA AGAAACAAAA
  ACCCTGAAAA GTAAAATAAA ACGAAAGCCA CAGAGCCCTG GATTTAAGAA TATTAACACa
  gctggccatg gtggtgcaca cctttaatcc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322941146	CHEV_9_44374972	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233512724					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44478186 () rs orientation: forward

Symbol	Name	Function Class
Tssr2844	transcription start site region 2844	896 bp downstream
Tssr89174	transcription start site region 89174	825 bp downstream
Tssr89175	transcription start site region 89175	874 bp downstream
Tssr89176	transcription start site region 89176	1220 bp downstream