rs233517621 SNP Detail

Summary

• ID
  rs233517621
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:75209306 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTTGTCTG GATTGGCAGC
  AAGTGCCTTT CCCCACTGAG CCACGTCACT CAGCAGCTCA TCTTGAGGCA TAGAGCAAAT
  GGGCAGAGCC CAGTGGAAGC AGATCTGCAG ACCCATTTTT CCATGATCAT CCCCAAAGGT
  TCTCTTCCAG TAAACTAGGG GGATCTTGGG GGAACCTGGA GACCCTCCCA AGAGTCTGCA
  R
  AGCCTTTGCT TTTTGCAAAA GCTGTGCCTG TATGAGGTAG AGTTCCCTCA TACTTAATCC
  AGAGCAATGT ACCTCAGCAC ACTGAATACA GAAGCAGGCA TCCCACAAAA TCTCCACAAG
  GTCAGACTTT AGGTTCACAG AGGACCCTCT GTCCTGCTTC TCACTGTGCT GCCTTTTTGT
  TTGTTTTTGC TTTTCATTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323007838	CHEV_9_75149831	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233517621					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:75209306 () rs orientation: forward

Symbol	Name	Function Class
Myo5c	myosin VC	within coordinates
Rr197409	regulatory region 197409	295 bp proximal
Rr197410	regulatory region 197410	895 bp proximal