rs233536418 SNP Detail

Summary

• ID
  rs233536418
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:11321837 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTTC TGCGTCCTAT TTCGGGAGAC
  A
  AAACTTTGGG CCATTTTCTC GGCTC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321043191	CHEV_4_11248984	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233536418					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:11321837 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14033	CpG island 14033	within coordinates
Dpy19l4	dpy-19 like 4	within coordinates
Gm26663	predicted gene, 26663	128 bp upstream
Rr588912	regulatory region 588912	within coordinates
Rr588913	regulatory region 588913	290 bp proximal
Rr588914	regulatory region 588914	301 bp proximal
Rr588915	regulatory region 588915	420 bp proximal
Tssr36477	transcription start site region 36477	63 bp upstream
Tssr36478	transcription start site region 36478	93 bp upstream
Tssr36479	transcription start site region 36479	393 bp upstream
Tssr40926	transcription start site region 40926	239 bp downstream
Tssr40927	transcription start site region 40927	272 bp downstream