rs233555953 SNP Detail

Summary

• ID
  rs233555953
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:83184671 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTGTTGTT TTGCTCCTTT GCAGTGAGAA
  GTAAGTGCTG GGGATTGATT TCCGGGCCCA GTCAACACCA GCCTGGAGAG AGGTGGGAGG
  AGCCTGCAGC TCTGGCTTCC AGTTCTTGGA ACTAAAGATG CCCCAAAGAT AAAGCAAGGA
  Y
  ACAAGGAGCT AATTTAAATC AGAAATGAAA GCAAAATCCC ACCTACATAG AAATGGGGAT
  GTCTCAAAGG AAACATGGAC ACTCAGAAAT GTGCAGGTGC CTCGCCAACT AGTAGAGCCT
  GCCCACAAAG CAGCTGGGGC ATTGGCGCAG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325036152	CHEV_15_83130900	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233555953					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:83184671 () rs orientation: forward

Symbol	Name	Function Class
Arfgap3	ARF GTPase activating protein 3	within coordinates
Rr304705	regulatory region 304705	1271 bp distal
Rr310865	regulatory region 310865	1854 bp distal
Rr314787	regulatory region 314787	within coordinates
Rr314788	regulatory region 314788	1931 bp proximal