rs233568464 SNP Detail

Summary

• ID
  rs233568464
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13252794 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTCCCTGT GACTTCCCTG
  TGACTGGCTG TTGCAACCAA AACAAATAAA AGAGACATTT GCAAGGTCAA ATATGATAGC
  CCCCTCCTTG TCCCTTTTCC ATGTCCAGCT CCCACCTCTC AGTCCGGCAC CCTAGCCTCC
  AAATGACATC TCTAATACCC CTCTCTCTGT GACTCTTGCC CTTCTGCTGA TGGAGCCTGG
  R
  AGTCCCACAT GGATCCCTGG AGTGGTCCTG GCCTGTGGCT CTCATGCAGG CTGGGAAACA
  TCTATGGGCC TCCTACACTT AAACTTGAGA ATGAAGGCAT GCTCTCCACT GTGAGAGTTT
  CACGGTCAAA CATGACCACA GGGTGGGATG CTGGCACTAG CCGAAGTTAG TTCGATAAGA
  ACAGCTGCCC TGGAGGAAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505071	CHEV_8_13202794	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233568464					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13252794 () rs orientation: forward

Symbol	Name	Function Class
2810030D12Rik	RIKEN cDNA 2810030D12 gene	1004 bp downstream
Cpgi20110	CpG island 20110	1360 bp distal
Gm56825	predicted gene, 56825	561 bp upstream
Rr659873	regulatory region 659873	1830 bp distal
Rr659874	regulatory region 659874	1311 bp distal
Rr659875	regulatory region 659875	1081 bp distal
Rr659876	regulatory region 659876	572 bp distal
Rr659877	regulatory region 659877	71 bp distal
Rr659878	regulatory region 659878	930 bp proximal
Rr659879	regulatory region 659879	1021 bp proximal
Rr659880	regulatory region 659880	1175 bp proximal
Tssr76387	transcription start site region 76387	1823 bp downstream
Tssr80429	transcription start site region 80429	1366 bp upstream