rs233590201 SNP Detail

Summary

• ID
  rs233590201
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:118687753 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATACATCCAA GGTATGCATG
  CTCATATACA TTAAACACCA ATCGTATGTA ACCGCCAGGG TTATCAGGTC AGTTTTCACA
  GACTCACGAG TAGCATCCAT TCTTGCAATA ACAGCCTCAA ACAGTCAACA TTGTACTGAT
  CCCAAACATT TTATCATTTT ATCTCACTGT ATGTTATTCT AGTTCATTGT TAGCCGATTG
  Y
  CACCTCTTTC TGAGCCTACT TTATGTAAAT ATAGTGTTCA GTGTTATCAA CCGCTTCAGA
  TATTCAGGAA ACGGTGAAGA GAGGCCTGCA GGGAAGAGAG GGGCAGGAGA GGAGTCTAGC
  CTGGGAGAGT ATGTTTGCTG GTGAGTTGGG TTTAGCTGGT CTTTACAAAC TTACCCTTGG
  CCTGTGTGTG TATATGTCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323503881	CHEV_10_118288904	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233590201					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:118687753 () rs orientation: forward

Symbol	Name	Function Class
Gm67702	predicted gene, 67702	1033 bp downstream
Rr226050	regulatory region 226050	848 bp proximal
Rr226051	regulatory region 226051	1849 bp proximal