rs233617633 SNP Detail

Summary

• ID
  rs233617633
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:156737225 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ctgttacct ggaccctagg aggcaaaggt
  cagagatcac aagcccaaga gcagcctaag ctacacagaa agttctaggt tagcctgggc
  tacacagtga gacccaatct taaacaagta aGTATTTTTA AACCCAGCTT TAagctgggc
  K
  tggtggcgca cgcctttaat cccagcactc ggtaggcgga ggcaggtgga tttctgagtt
  cgaggccagc ctggtctaca aagtgagttc caggacagcc agggctacac agaaaaaccc
  tgtctcgaaa aaccaaaaAA ACAAAACAAA                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320073026	CHEV_1_158839786	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233617633					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156737225 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ralgps2	Ral GEF with PH domain and SH3 binding motif 2			Intron
				Noncoding-Transcript-Variant
Rr396428	regulatory region 396428			1382 bp upstream
Rr421275	regulatory region 421275			411 bp proximal
Rr421276	regulatory region 421276			1352 bp proximal