rs233665760 SNP Detail

Summary

• ID
  rs233665760
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132238275 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTTCTTCAG CTTTCCAGTT CCTGGAGGGA
  CTGGTTAGGT CTGCAGAGAG TTCTAACCAC ACACATCCAG TTCTTCTAAT TATAGATCAA
  AACCCACAAA TTTGAAGCCA AGAGCCACCA CCCTGTCCCC TCAGGCCCTG AGGGATCTGC
  M
  CCTTCAGAAA CACTAAACCA AGGAAATCAC CTTATTTGTG GAGTCTCTGG AAAAGCCCTC
  ACTGAAATAC CCTTGACAAT CTCAAATTTA ATCTCAATCC TCATTGCTAC AATTTCCCCT
  CTTCTGTCCT GCCTTGGGTG CCTTCACACC                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321333913	CHEV_4_132066879	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233665760					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132238275 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14964	CpG island 14964	189 bp distal
Gm12981	predicted gene 12981	1315 bp upstream
Gm68741	predicted gene, 68741	1997 bp downstream
Rr377206	regulatory region 377206	within coordinates
Sesn2	sestrin 2	508 bp upstream
Tssr43678	transcription start site region 43678	487 bp upstream
Tssr43679	transcription start site region 43679	473 bp upstream
Tssr43680	transcription start site region 43680	455 bp upstream