rs233686037 SNP Detail

Summary

• ID
  rs233686037
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:16859117 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCAG GTCTCACTCC CGCAGCTTCC
  C
  TCCAGCCTGG AAGTTGCGCA TTGTG                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323920162	CHEV_12_16815922	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233686037					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:16859117 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4441	CpG island 4441	1478 bp proximal
E2f6	E2F transcription factor 6	1815 bp upstream
Rr463369	regulatory region 463369	699 bp distal
Rr463370	regulatory region 463370	1375 bp proximal
Rr463371	regulatory region 463371	1872 bp proximal
Tssr112858	transcription start site region 112858	1824 bp upstream
Tssr112859	transcription start site region 112859	1863 bp upstream