rs233707451 SNP Detail

Summary

• ID
  rs233707451
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:110231363 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCCAAGAA CACATCATTT
  ATCAACGGTG TTGAGTCATT TTGTGAGCTG ATTTGAACCT GTCCACAGCT AAGAAATAGT
  CACAGTTCTT TTTTTTTTTT TTTTTTTTAA TCTGTAGCTA CTGTTGCTGG CTGTGGGAAT
  GGTATCACCC ATTTGTAATC AACCAAGGGT ACCAGACGAT TTCTAGAAAG TTCAGCACCA
  R
  CAGGTTGTCT GAACAGCTAA GGGTGGAAAG GAGAGATGGG GTGGGCCAGA AACCAGTTCT
  TTTTTTAGTT CTTGCTTGGT GTCAACTATT CTTCTAGCCA CTTTCTATAC CTTATCTCAC
  CAAGTTCTTA CAGTAGCTTT CTGAAGGAGG TGTTATTATC TCTCTTAGTA GATAAGGAAG
  CTGAACTTCA GAGAGGTGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322397543	CHEV_7_117775670	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233707451					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:110231363 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19578	CpG island 19578	1353 bp distal
Gm28863	predicted gene 28863	1259 bp upstream
Gm72687	predicted gene, 72687	1934 bp upstream
Rr400547	regulatory region 400547	1648 bp downstream
Rr653271	regulatory region 653271	1945 bp distal
Rr653272	regulatory region 653272	1444 bp distal
Rr653273	regulatory region 653273	1790 bp distal
Rr653274	regulatory region 653274	233 bp distal