rs233738584 SNP Detail

Summary

• ID
  rs233738584
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:66951943 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGTGTGGA AGCAGGCTTA
  CATCAGCCAA AGCAAACGTT CCCCTATCTT ACTCTGGGTG GTGGCTGTAG CCTACTGAGA
  CTGTGTAACC AGTAGGCTAA TTCCCATCTC GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT
  GTGTGTGTGT GTGTGTATAC GTACACTCAT GGCTATTGGT GTGTCAGTTC ATAAAAGCAT
  R
  GATTTGGAAT GAGGTCATTC TCTGACCCCC AGCTCTGCAG CCCATGGTGT GGCTGCACAC
  ATTTTTTTTT TTTTTTTTAC CTCTGTCTCT CAGTTTCTTT GTGTTCTCCA TATTGGAAGA
  GTAAACCTTT CTTATAAATG TCAAGCATGG AATAAATGAG TCGATAAACG TGAAATATTC
  TTGATCCTAC TTCACTTTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323345121	CHEV_10_66578912	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233738584					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:66951943 () rs orientation: forward

Symbol	Name	Function Class
Jmjd1c	jumonji domain containing 1C	within coordinates
Rr215832	regulatory region 215832	1143 bp distal
Rr215833	regulatory region 215833	1658 bp proximal