rs233761003 SNP Detail

Summary

• ID
  rs233761003
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:96511123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGTGATCC TGCTTGCTAA
  GCAGGCACTT TACCAACTGA GCCATCTCCC CACCCGCTGG TTTTCTGATC TGTCAACTTG
  ATACTATTTA TACCTTGTGA AATCTATGGG ACACAAATAA GTTAGAAATG AAACACTGAA
  GAAAGTGTGG ACCATTATCT AACCTCTAGA ACTTCCACAA TATAAACATC GGGCCACCCT
  S
  GCTCTTCTTA AGGATGATTC GGACTACACT ACCCAGGAGT GCTTCCTCTC AGGTGGATCA
  GATGAGAGGC TCCCAAAGAG CAGTTCTGAG CTTAACAGCT CATCTCCAGG CTAACAGGGA
  GCTACCAGGT TCTCCCCAAG GTTTCTCAGT GTGGTAGAAA GGACTGGTGA CTTCAACACT
  CGCAAACTGC TTAGATTCTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323111044	CHEV_9_96529489	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233761003					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:96511123 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22167	CpG island 22167	1373 bp proximal
Rasa2	RAS p21 protein activator 2	within coordinates
Tssr86611	transcription start site region 86611	1923 bp upstream
Tssr90973	transcription start site region 90973	1555 bp downstream
Tssr90974	transcription start site region 90974	1801 bp downstream