rs233810072 SNP Detail

Summary

• ID
  rs233810072
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:35016441 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    agaaaggag catagtcctg agtttaaagc
  tagcctggtc tacatatttg ataaatagaa ggccagcttg gactatatag aaagacccta
  tcttaTACCC ACTCCTGCCa aaaaataaaa ataaaataaa ttttaaaaaG GCAGTAAGAG
  Y
  TAAATACCTA ATAAaaaatg gaacaaaaca aaacaaaaaa aaaaaaaaGG CAGTAAGAGT
  CTCAGTGAAA ATGTCTCAGA GGTATAGCCA ACAGGTCAGG ATGGGAAGCA GGAGGCGGCA
  GTGGGGGGAA GCCTCACCAA CAAAAGTCTA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322156911	CHEV_7_36102035	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233810072					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:35016441 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18869	CpG island 18869	1051 bp proximal
Gpatch1	G patch domain containing 1	within coordinates
Tssr72030	transcription start site region 72030	1392 bp downstream