rs233826849 SNP Detail

Summary

• ID
  rs233826849
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:20987706 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCGAGCATT GGGTACAGCA GATGATGTCC
  GAATGTCCCT TGGAGCCCAG TATGCCATGG TAGGAAGGCA GCCATGAGTT CAAAATTCAA
  GAACAACTTG TCTTACTTAG TAGCTACAGG CTATCCTAGG ATATGATGGG GACCTTGCAT
  Y
  acacacacac acacacacac acacacacac acacacacac acTGGAGGAT GGAATAGATA
  GTCACAGAGA GAGTCAGATA CAGAGAGATA GACACAGAGA CAGAAATCTA TGGCCTCTGG
  TGCGCTGTTC TGTTTACTCT CTTTGCTGAC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319654647	CHEV_1_20907563	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233826849					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:20987706 () rs orientation: forward

Symbol	Name	Function Class
Gm24171	predicted gene, 24171	1942 bp upstream
Paqr8	progestin and adipoQ receptor family member VIII	within coordinates
Tssr6058	transcription start site region 6058	358 bp upstream
Tssr6059	transcription start site region 6059	374 bp upstream