rs233828247 SNP Detail

Summary

• ID
  rs233828247
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67145005 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCCTTTACT TCCCATCACA
  GGGGAACCTT GAGAAGATGT GCCGCACCCT GGAGGACCAA CTGAGTGAAG TGAAGACCAA
  GGAGGAGGAG CAGCAGCGCC TGATCAATGA ACTGTCAACC CAGAAGGCAC GCTTGCACAC
  AGAGTCAGGT CAGTCTGTGC CACACTAGCC TGGGAACAGC AAAGCATGAG AGGTCTGCCC
  S
  ATCCTGGACG CTGGGGTCTT GCCCTGCACA ATGTGTACAA GAGATGGTTA CAAATGAATG
  ACTCTAAGCT ATGATTAGAG GCGAGTTGGG AAATGAACCT CTTGGGCTTG GGAAAGTTTT
  GTTACCTCCA TAACCCTCAA GAATCCCCCA TTCTACAATA CCAAAGAAAG CAGTTCACGA
  ACATTCTGGA GACACTCTTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323719226	CHEV_11_67067681	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233828247					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67145005 () rs orientation: forward

Symbol	Name	Function Class
Myh4	myosin, heavy polypeptide 4, skeletal muscle	within coordinates
Tssr3528	transcription start site region 3528	554 bp upstream
Tssr3529	transcription start site region 3529	610 bp upstream
Tssr102201	transcription start site region 102201	661 bp downstream
Tssr102202	transcription start site region 102202	172 bp downstream
Tssr102203	transcription start site region 102203	109 bp downstream
Tssr102204	transcription start site region 102204	276 bp upstream
Tssr102205	transcription start site region 102205	494 bp upstream
Tssr102206	transcription start site region 102206	598 bp upstream
Tssr102207	transcription start site region 102207	1242 bp upstream
Tssr102208	transcription start site region 102208	1412 bp upstream
Tssr102209	transcription start site region 102209	1447 bp upstream
Tssr102210	transcription start site region 102210	1465 bp upstream
Tssr102211	transcription start site region 102211	1475 bp upstream
Tssr102212	transcription start site region 102212	1497 bp upstream
Tssr102213	transcription start site region 102213	1649 bp upstream
Tssr108534	transcription start site region 108534	1575 bp upstream
Tssr108535	transcription start site region 108535	1469 bp upstream
Tssr108536	transcription start site region 108536	125 bp upstream
Tssr108537	transcription start site region 108537	104 bp upstream
Tssr108538	transcription start site region 108538	379 bp downstream
Tssr108539	transcription start site region 108539	587 bp downstream
Tssr108540	transcription start site region 108540	647 bp downstream
Tssr108541	transcription start site region 108541	1256 bp downstream
Tssr108542	transcription start site region 108542	1417 bp downstream
Tssr108543	transcription start site region 108543	1532 bp downstream