rs233852238 SNP Detail

Summary

• ID
  rs233852238
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:55969198 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATAGTGGT GAATCACACA
  GACTTTTGTT TTTTAGTTTA ATGTATTTTA ATAGCAAACT TACAGGAACA GCACAGAAGA
  CAGACAACAT TAAAAGCACA TACTTGCATG CAGGACAACT CAGTTAGAAA AGTATGGTGA
  GAGGATGGAA AGTATTGGAT GATAAAAATG ATACAGACCA TTTAGTTGCC GTCAATAAGA
  R
  ATTTACTTAT TTAAAAAAGA ATTCAAATGC TGGCATTGTC CAGGAAATTC TAACAGGTTT
  ATTTATAATT GTTATAAAGT TGAACTGTGA AATATGTTCA CGGAAACATT TTGCTTGCAT
  TAATGCTTTA CATCTTGCAT TTATATTAAA AATTCACACA CAAATGTACG TGGAGAAACT
  GCCAATACCT GATTCTGCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325191242	CHEV_16_56148948	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233852238					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:55969198 () rs orientation: forward

Symbol	Name	Function Class
Gm49682	predicted gene, 49682	331 bp downstream
Senp7	SUMO1/sentrin specific peptidase 7	within coordinates