rs233855817 SNP Detail

Summary

• ID
  rs233855817
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:79132660 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGAAAGACA CAGCTCTCAC
  CCATCGGTCA TTTGCTCCTC CAGCAAATAT TGGAGTGGGC GAGGGAAACA GGTGCCTGGG
  GTCAGAGACA CATTTGCAAA GTTTCAGAAT CAATTCAAGA AACAAAATAG CCCTGGTACC
  GAGTTCACTG GCCTCTGAAT AAGGTTTAAA GTGGGGCTTT GATGATACAA CTAAGACTGA
  G
  GAGAACTGTT ACAGCCGAAT TCAATGAAAC AGAGAGCTGT TCATTTTACA TTTTTGTTAG
  GGATTCTAAC TTTATACAAA TTCTTCAAAT CTATATATAC TGAAAGCCAA TGTTGGGTTA
  CTAACTGAAA TAATTCATGT GGTACTCACC CAAACTCCAT CAGAAGGTCT CCATTGTGTG
  GATCCCAGAC ATACACACGA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323759386	CHEV_11_79055336	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233855817					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:79132660 () rs orientation: forward

Symbol	Name	Function Class
Gm30470	predicted gene, 30470	within coordinates
Tssr109468	transcription start site region 109468	1920 bp upstream
Tssr109469	transcription start site region 109469	657 bp downstream
Tssr109470	transcription start site region 109470	1480 bp downstream
Tssr109471	transcription start site region 109471	1547 bp downstream
Tssr109472	transcription start site region 109472	1622 bp downstream
Wsb1	WD repeat and SOCS box-containing 1	within coordinates