rs233887724 SNP Detail

Summary

• ID
  rs233887724
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:72429065 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAGAGAAAT TTGCCAAGGC CACACTAGTG
  CATAAAGTAG GCATGAGTTA GCCAGATAGA AGTGATATTT CACTCTTTAT TAATATCCTT
  TGATGCAAAA TTAAGAGTGT TGTTAATCTT GTTAACTCAT TTATAAGTGC ACTATTTttt
  Y
  ctttctattg atacaggcat ttaatgtgtg ccctgactgg tcttgaactc cgtagactag
  gctagcctca tattcacaga gatctgttta actctgcttc tcaagtactg agattaaagg
  tgtatgtcac tatgcttggc tTTATAAGAA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320343250	CHEV_2_72436778	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233887724					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:72429065 () rs orientation: forward

Symbol	Name	Function Class
Rr558998	regulatory region 558998	349 bp distal
Tssr18356	transcription start site region 18356	1173 bp downstream