rs233888056 SNP Detail

Summary

• ID
  rs233888056
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:101197050 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAGCTTTA GATGATTTTA
  AATTATCTAT TTATTTATTT CTTATTATAA GTAAGTACAC TGTAGCTGTC TTCAGACACA
  CCAGAAGAGG ACGTCAGATT CCATTATGGG TGATTGTGAG CCACCATGTG GTTGCTGGGA
  TTTGAACTCA GGACCTTCTG GAGAGCATCT CTTACCCGCT GAGCCATCTC ACCTGCCCCG
  R
  TCTTAAATTT TTATGAAGTC AAATATATCT ATTTATTGAC TGGCTGACTG GCTGCTTGAC
  TGATTGGTTG AGGGAAGGTC TCAGTTTGTA GTCCTGGATG GCGTGGAACT CTCTACATAG
  ATAGGCCAGG CTAGCCTCAA AGACACAGAG ATAGATAGCC CTGCCTCTGT CTCCTAAGCA
  CTGGAATTAA ATGTGTGCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323832797	CHEV_11_101167538	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233888056					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:101197050 () rs orientation: forward

Symbol	Name	Function Class
Gm11617	predicted gene 11617	518 bp upstream