rs233934602 SNP Detail

Summary

• ID
  rs233934602
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:151335555 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTGTCATGT TCAATACTTG TTAAACTGAA
  TATTTCCATA TCAAACTTTG CTAAATATTC ATTAACCTGA TTACACTGAT CAGTGCTGTG
  TTGAATGTTA TGCAAAAAGC TAAATTTGGT GGTGGGGTGT ATTTTTACTT TAGTTTTTTG
  K
  TTTGttttct gtttttgaga cagggtctga ctatagctct gactgacctg gaattcacta
  tgtagactag gctggcctcA TGATATATCA TGGGTTATAA GGTAGGGTTT ATGAATTTGT
  CACAGAGTAA CTAAACCTTT TAGTGAGGTA                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320056661	CHEV_1_153306934	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233934602					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:151335555 () rs orientation: forward

Symbol	Name	Function Class
Rr372239	regulatory region 372239	203 bp upstream
Rr420294	regulatory region 420294	1642 bp proximal
Trmt1l	tRNA methyltransferase 1 like	1643 bp downstream