rs233956247 SNP Detail

Summary

• ID
  rs233956247
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:24245048 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCACCAAAC CTACCTTTCA
  CCTTCTAAAT GTTGGGATTA CAGGCATGTG CTACTATATT GCAATCCTGG GTTTACTGAG
  GGCCAGCAGC CATCTCTCCA GTCTCTCCTT CATCCATGAC CCAAGTAAGA GGTCTCCATC
  AAGGATCTCC CATCTTCCTC TCATTTGATG GGCATACCCT TTCACTGTAC ACCAAGTTTA
  Y
  TCTTAGAATC TATAGACAGT CCTTTCCCAA ATTCAAATAT TGTTGAATTC AGGACCAAGA
  CAAAAATCTT TGCCTCACAA GGTATAGTGG GTACACAGTG ATAACCCAAG CATTAAGAAA
  CTAGAGCTGG AGAATCAAGA GTTCCAGGCT AGCCTGGACT ACAAGACAGC CAGTCTCAAA
  ACACACAGTA AAAACCGTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324294218	CHEV_13_24152934	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233956247					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:24245048 () rs orientation: forward

Symbol	Name	Function Class
4933427I18Rik	RIKEN cDNA 4933427I18 gene	within coordinates
Carmil1	capping protein regulator and myosin 1 linker 1	within coordinates
Rr475992	regulatory region 475992	1737 bp proximal
Tssr121764	transcription start site region 121764	1752 bp upstream
Tssr121765	transcription start site region 121765	1741 bp upstream