rs234004158 SNP Detail

Summary

• ID
  rs234004158
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147978810 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCACCCCAT TCTGTCTCCA
  CTTGAATGCC CCCATCCCCC AGCACACCTG ACCTCTAAAC TCCCTGGAGC CTCCAGTCTC
  TTGAGGGTTA GGTGCATCAT CTCTGAATGA ACACAGACCT GGAAGTCCTC TAGTGGATAT
  GTGTTGGGGG CCTCATATCA GATAGTGTAT GCTGCATGTT TGGTGGTCCA GTGTTTGAAA
  K
  ATCTTGGGGT CCAGATTAAT TGAGACTGCT GGTCCTCCTA CAGGATCACC CTTCTCCTCA
  GGTTCTTTCA GCCTTCCTAA TTCAACAACA GGGATCAGCT GCTTCTGTCC ATTGGTTGGG
  TGCAAATATC TGCACCTGAC TCTTTCAGCT GCTTGTTGGG TCTTTCGGAG GGCAGTCATG
  ATAGATCCCT TTTTGTGAAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321014847	CHEV_3_147936138	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234004158					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147978810 () rs orientation: forward

Symbol	Name	Function Class
Rr375892	regulatory region 375892	789 bp upstream
Rr587183	regulatory region 587183	708 bp distal
Rr587184	regulatory region 587184	406 bp distal