rs234014578 SNP Detail

Summary

• ID
  rs234014578
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:52220202 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCATC ACTGGGAAGA GAGGCCCTTG
  G
  TCTTGCAAAC TTTATTTGCC CCAGT                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324626429	CHEV_14_52602420	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234014578					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:52220202 () rs orientation: forward

Symbol	Name	Function Class
Arhgef40	Rho guanine nucleotide exchange factor 40	1974 bp upstream
Cpgi6430	CpG island 6430	1639 bp proximal
Gm62631	predicted gene, 62631	within coordinates
Rr491846	regulatory region 491846	683 bp proximal
Rr491847	regulatory region 491847	1603 bp proximal
Tssr125437	transcription start site region 125437	1743 bp upstream
Tssr125438	transcription start site region 125438	1781 bp upstream
Tssr125439	transcription start site region 125439	1951 bp upstream