rs234034312 SNP Detail

Summary

• ID
  rs234034312
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55254677 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGCTGTCAC TGCACAAATC CAAGCACTGA
  CGACAAAAGT TCGAGCTGGA ACGTATTCTA CAGAGAAGGT AAGGGCTCCT GCACAGGCTG
  GAGGGCCAGC TCCGTGGTTA CGTCACCCGT CCAGGTGACG TAACCACTTG GATCCCAGCA
  Y
  TCGTGTCTAC ATGACCCACA ATTCTAGCTC GGGCATCCCA TACACATGTG CCGTGTGAAT
  GTACATACAC ATAAATAACT GTAAATCTTA AGGGGGGGGT ACTTGAAGAG GGAGGACCTC
  CTCATATGAT GTGCTTGCTG GTTTGGTTTG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324641594	CHEV_14_55636057	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234034312					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55254677 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6482	CpG island 6482	1126 bp distal
Gm63347	predicted gene, 63347	1419 bp upstream
Ngdn	neuroguidin, EIF4E binding protein	within coordinates
Rr369831	regulatory region 369831	1597 bp downstream
Rr492392	regulatory region 492392	1756 bp distal
Rr492394	regulatory region 492394	1430 bp distal
Rr492395	regulatory region 492395	938 bp distal
Rr492396	regulatory region 492396	1041 bp distal
Tssr125743	transcription start site region 125743	1649 bp downstream