rs234075958 SNP Detail

Summary

• ID
  rs234075958
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132186197 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTAGGAAG GAGTTAAGAC
  GAGTAAGAAT CAGAATCACA ACTGAGTCTT TTCAGTCTTT ATTACCACAC AATGCTGGCT
  CACACCACCA TTGTAAACCT TGTATATCAA TGGCAAAACA ACACAATTTA AAACATATGA
  AGAAAACAAC AAATAAATAA AGGAATAAAA AATGTTTCTC TAAAAAAAAC AAAAAAAAAA
  M
  AAAAAAAAAA AAACAAACAG CCGGGCTTGC GTGTTATCGC ACGCCTTTAA TTCCAGTACT
  CGGGAGGCAG AGGCAGGTGG ATTTCTGAGT TTGAGGCCAG CCTGGTCTAC AAAGTGAGTT
  CCAGGGCAGC CAAAGCAACA CAGAGAAACC CTGTCTTGTA TTGAAAAACA AAACAAACAA
  ACAAACAAAC AAACAAACAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CE/J	CZECHII/EiJ	FVB/NJ	NOD/ShiLtJ	NON/ShiLtJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SJL/J	ZALENDE/EiJ
ss363294710	MGP_WTSI_4_132014801	EVA_MGPV3	EVA_MGPV3	f	SNP	C	A	C	C	C	C	C	C	A	A	C	C	C	C	A	A	C	C	C	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CE/J	CZECHII/EiJ	FVB/NJ	NOD/ShiLtJ	NON/ShiLtJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SJL/J	ZALENDE/EiJ
rs234075958					SNP	C	A	C	C	C	C	C	C	A	A	C	C	C	C	A	A	C	C	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss363294710	MGP_WTSI_4_132014801	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132186197 () rs orientation: forward

Symbol	Name	Function Class
Med18	mediator complex subunit 18	within coordinates
Rr377204	regulatory region 377204	within coordinates