rs234109501 SNP Detail

Summary

• ID
  rs234109501
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:125998723 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gtaaaactg cttgaaaggg attaggaggt
  gtgaacttgt cagagaaggt atatcactgg ggtgggcttt gaggttttaa aaacctatgc
  gtgggccatt gttctctctg gcttcggatc aggctctaaa agctattacc tcagtgccaa
  K
  actgttttct accatgatga tcaggaattt accccctggt actgtgagcc cctaattaaa
  tgctttcttt tgtaagaact gtcatggtca tggtAggtag ctggagctca gggcagctgg
  ttacatttaa tctgcactca gaaggggaaa                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319959160	CHEV_1_127967563	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234109501					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:125998723 () rs orientation: forward

Symbol	Name	Function Class
Gm35562	predicted gene, 35562	within coordinates
Gm37936	predicted gene, 37936	within coordinates
Nckap5	NCK-associated protein 5	within coordinates