rs234109928 SNP Detail

Summary

• ID
  rs234109928
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:65108067 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CATACAGCT CAGAAGAACC AGAAGAAAAG
  AAAGCACACA CAGAAGATTT GTCATCAGCA CAGATCATTG ATGGGGATTT ACAGGCAAAT
  CAAGCTGCAT ATAATTACAG TGCCTGGTAC CAGGTAAGGC TGCACCACTT ACTCTGTGCA
  Y
  TGGGGGCTCT ATACTGTATG TATCTTTTGC AGTGGAGTGC TGGGATTTAA TCAGTGCCTA
  TTACTAATTT TATATGTAGA TCATAACTGT GATTCTAGTT TGGTGACATG TTTGCTTTTT
  ACCTTTTCAG TACAATTATC AGAATCCTTG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324071940	CHEV_12_66162280	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234109928					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:65108067 () rs orientation: forward

Symbol	Name	Function Class
Fkbp3	FK506 binding protein 3	1139 bp downstream
Prpf39	pre-mRNA processing factor 39	within coordinates
Tssr113604	transcription start site region 113604	438 bp upstream