rs234111015 SNP Detail

Summary

• ID
  rs234111015
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:33036468 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AACCTTGAA GGCCTGCAAA CCGACCTCCG
  CCCCTAGCAG GCTGGCAGTT ATAGGCCTGT ATAGTCCAAC TGGGTCAGGT TCATAACTTG
  GGCCAACAAA CCACAGGGGA GGCGCCTGGG AAAACGAAAT TATCAGGTGG AAGGGAAAGA
  R
  CCAGAAGCCA GAAATTAGCA GCAGGGTCAG GAATGACTTG AATGGTAATA CCAGAAGAGG
  GGCAGGGAAT AACAGAGGCA AAGAAGAGTA ATCCTTAAAA CACCAATTCA CTCTGAGAAA
  GAACTGTGCG TGGAAAAGAA GGGCTTGGGT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321780404	CHEV_6_33009533	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234111015					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:33036468 () rs orientation: forward

Symbol	Name	Function Class
Chchd3	coiled-coil-helix-coiled-coil-helix domain containing 3	within coordinates
Cpgi17277	CpG island 17277	221 bp proximal
Rr146107	regulatory region 146107	within coordinates
Rr399607	regulatory region 399607	701 bp upstream
Tssr60218	transcription start site region 60218	639 bp downstream
Tssr60219	transcription start site region 60219	723 bp downstream