rs234144994 SNP Detail

Summary

• ID
  rs234144994
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:50845101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACCTTGGTA TTTGTGTATT
  TCATCTGGAC ATGACTATTC TTCCAGTTAA GTTAACTTCA GTATAACTAT CGGTCTGAGG
  AAACTCACAG CGGTAAAATA ATTAGCCTCA TATTACAGAT GTAAGCTAAG GCAGTGTTGT
  TTGCCACAGT GTCTGCAGTT TCCCGGCAGT ACGTGTTCCC ATCCAGGACT TTATATTGCA
  Y
  ATAGATGTTG CAGATTACAT TTTTTATTTA AATAGATCCT TGTTTCCACT ACTTTTCTTC
  TATGTTATTG TCAGTCATAG AGAATAAAGC ACAGCTGTTT TATGTATTTT TTTGAGTTTG
  TGCTGCACCC CCATTGTTCA CTCCAATTAC CTGTTACCTC CGAAGTATCC CCATGAGCAC
  CATTACCAGA GTATGTTCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323299473	CHEV_10_50688811	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234144994					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:50845101 () rs orientation: forward

Symbol	Name	Function Class
Sim1	single-minded family bHLH transcription factor 1	Intron
Tssr93227	transcription start site region 93227	356 bp upstream