rs234167325 SNP Detail

Summary

• ID
  rs234167325
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:73755199 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGAACTAGA AGGTTCCAGG
  AAAGGATACA GTACTTACAA AGATGAGTGG TTTGTATCCA TATCAAGTTC TGGCCAAGAC
  AGCAAAGTGG CTCTCCATTC CCTACAAAGG CACCAGCCAG AAATGATGAT AAAAATCTCA
  TCAGGACAGT AGCTGAGTGG CGGAGTTGCT GGGTTGGTAC ACAGTTTTCA AATGCATGTT
  Y
  TGTTTTGTTG TTTTAAACAA CAGAGCTAGT GAGAATAAGG CATTTTTTAG CCAAGGAACA
  CTTGGTTACA AGGGACCCGT GTCACAAATC TAGCACATGC TGTTGTCCTC GGTGCTTTGA
  AGCTGACTTT GCTTCCGGGT CCTTTCATCT TCATTGGGGC TGTCAGCCTA TTGGCATTTA
  TGGCCTGGAA TGGAGGCCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324098776	CHEV_12_74809412	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234167325					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:73755199 () rs orientation: forward

Symbol	Name	Function Class
Prkch	protein kinase C, eta	within coordinates
Rr257348	regulatory region 257348	202 bp proximal
Rr268128	regulatory region 268128	within coordinates