rs234272541 SNP Detail

Summary

• ID
  rs234272541
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:20906519 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTCTTTAT ACTTTGTGTC
  TGCCCTGTAT TTGTTAATGT ATGGGGGCAC ACTGGGCATG CCACAGTGCA CACACGTGGA
  GGTCAGAGGA CAACCTGCAA GAGCTGGTTT TGTCCTTTCC ACCACGTGAG TCTGAGGGAT
  TGAATACAGG TCGACAGACT TGGCACTGGT ACCTGCTGAA CCATCTTACC CTGCCCTCAT
  C
  TCTGTTTTGT GAGACAGGCT CTCACACTGC AGCTCAGGCT GACAGACTAC TCATTAACTA
  TGCCAGGCTG GCTCAAACCT AAGGCAGTCC TCTGTCTCCT CAGTGATGGG GCCACAGGCT
  GGTACTACCA CCTGCAGGTC CTTTTGTATT TGTGCAGTGT TCTTTGACAG ATGTGTGAAT
  AAGGCATGCT AGTGCACACT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322873772	CHEV_9_20799667	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234272541					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:20906519 () rs orientation: forward

Symbol	Name	Function Class
Rr193936	regulatory region 193936	within coordinates
Rr203233	regulatory region 203233	within coordinates
Rr208290	regulatory region 208290	1680 bp proximal