rs234284500 SNP Detail

Summary

• ID
  rs234284500
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:155867418 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTCTGGTG TGTCTGATGA
  CAGCTACAGT GTACCCATAT AAATAAATAA ATACATCTTT AAAAACAAAA CAAAACAGAT
  AGATAGGCAG GCCGGCAAAC AGACAAAAGA CAACCCATCA TGACAGGTTT ATGTCATCTT
  ACATTTCCCA GATCTCACTA CACTAAAAGT AGTCAGGGCA AGAACTCAAG GCAAGAACCT
  R
  GAGGCAGGAA TTGAAGCAGA ACCTTACAAC CAAAACAGAT CTGGAGGGCT CACTCAGTAG
  TAGAAGTAGT AGAATTTCTG TTTTAAAATT AAAATGTTCA AGGCTTAACC CTGGATGGTA
  GCACACACCT TTATTCCTAG TACTTGGGGG TGGGGAGTGG GGCAGAGACA GGCAGATTCC
  CTGAGTTCAA GGCTAGCCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321442821	CHEV_4_155157070	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234284500					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:155867418 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15485	CpG island 15485	1054 bp proximal
Rr606568	regulatory region 606568	1538 bp distal
Rr606569	regulatory region 606569	1184 bp proximal
Rr606570	regulatory region 606570	1684 bp proximal
Tmem278	transmembrane protein 278	within coordinates
Tssr44971	transcription start site region 44971	1061 bp downstream
Tssr44972	transcription start site region 44972	1937 bp downstream
Tssr44973	transcription start site region 44973	1975 bp downstream