rs234307103 SNP Detail

Summary

• ID
  rs234307103
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:128614702 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCATGCATG AATATGTGTG
  TGCATGTGTG CAGGCCAGAG GTTGCTATCA GGTGTCTCTC TCAATCACTC TTCACTTTAT
  ATATTGAAAC AAAAATCTCT CTTGTGAACC CCAAGTTCAC AAGTTTGACT AATTCTCTAG
  CCAGCCTGCT CCAGGAACCC CCTGTTTCCA CCTCCCAAGT GCTGGGATTA TAGGTGGGCT
  K
  CTACACCCAC CCCGCCCCTG GCATTATGTA AGCACCAGGG ATCCAAACTC TGATTCTCAT
  ATTTACACAG TAAACAACCC TCCCCCCAAT CTCCTTGCTG GGCTTCCCAA CTACAAGACA
  TCCTGAGTTT TAAAACAATT TTTCCAATGA TTTCCACTAA GATTTAGAGC TGGAAGACAT
  ATATGACCTC CTAGACTAGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321306923	CHEV_4_128398153	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234307103					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:128614702 () rs orientation: forward

Symbol	Name	Function Class
Gm33712	predicted gene, 33712	466 bp downstream
Phc2	polyhomeotic 2	within coordinates
Rr600012	regulatory region 600012	315 bp distal
Rr600013	regulatory region 600013	172 bp proximal
Tssr39071	transcription start site region 39071	1272 bp upstream