rs234317189 SNP Detail

Summary

• ID
  rs234317189
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:91454828 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTGTGTGTG CTGGGGTAGG GACTGGCTCT
  CTGTGTTGTA TTAATGGTCT ACTTACAGGC TTTACAAGCC TGAAGGGAGA GGTGATGTTC
  GACTCCAGCG TTTTGAAGTA TATCCTGTGC TGGGTCCAGT GCTCAGCCCA GCAATGAAGC
  R
  GTCAGCTGAC CCTGCTGAAC AAATGAGCCG GGCCTGGGCC GAGAGTCTGT GTAAGCCCTG
  TGAGTGCTAT ACTGAGGAGG GTGTCTCCCG GCAAGGAGGC ACTGGTGCAG GCTGTGTCCG
  GTGTCTGTGG GACCTCGGCA GTCCACTTCC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319840927	CHEV_1_93423683	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234317189					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:91454828 () rs orientation: forward

Symbol	Name	Function Class
Rr23655	regulatory region 23655	373 bp proximal
Rr28197	regulatory region 28197	835 bp distal
Traf3ip1	TRAF3 interacting protein 1	within coordinates
Tssr8094	transcription start site region 8094	926 bp upstream