rs234320338 SNP Detail

Summary

• ID
  rs234320338
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:102334989 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTGATTGGC CCAGGTTTCC AATATTCTAC
  TTCGGGAAAA TCACCCATCT TCCCCAGCTT CAGGGTAGAG GACAAATTCA AAAGCAGAGA
  GGAAGAAACC ACTGTGTTGA GTCTGGCAGA AGGGCGTTTT GTAGGAACGA GAGCAGAAGC
  Y
  TGTAGGACTG AGATCAGGTC GTCCTCAGGT TGTTACTCCT TCTTGCTGTT TCCCCTGCTT
  TCTGTCTCTC TGCTTCCACC GTCTCCACCC AGCCATGAGA TCCAGAATCC TAAGATCCAG
  TTGTGCACTA ACGAATACTG AACTCAAAGG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322357781	CHEV_7_109834296	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234320338					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:102334989 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19528	CpG island 19528	1192 bp proximal
Gm45527	predicted gene 45527	within coordinates
Rr652623	regulatory region 652623	859 bp proximal
Rr652624	regulatory region 652624	1478 bp proximal
Trim68	tripartite motif-containing 68	within coordinates
Tssr73953	transcription start site region 73953	1470 bp downstream