rs234342359 SNP Detail

Summary

• ID
  rs234342359
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:75064759 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGCCAGCCT GGGTTTGGGC AGATACAGAG
  CAAGAGGAGG CGGGGCGGCG ACGCAACATT CGATGTGTCT GCGGAGGTGG CAAGAGGTGT
  GCTCAGAAAG GCGGCCTTTC AGGCTGCTGT GCATCTACCT CGGTGCAGAA GCAAGATCCG
  S
  GGAGTGTCTG AACATCCTCC TCAGAGACTC TCCTGTCTTC CTAGTCGAGG TATCGCTGCC
  TAAGGTGGCG AGAAAATGGG TGGTTCTGCG ATAAGGATTC TTATCTCATG AGTGGTGAAC
  CGATGGGATC AGGAGTCCTG TGAGAAGGAA                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323750384	CHEV_11_74987435	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234342359					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:75064759 () rs orientation: forward

Symbol	Name	Function Class
1700016P03Rik	RIKEN cDNA 1700016P03 gene	within coordinates
Cpgi3254	CpG island 3254	within coordinates
Mir132	microRNA 132	186 bp downstream
Mir212	microRNA 212	455 bp downstream
Mirc19	microRNA cluster 19, including Mir212 through Mir132	186 bp distal
Rr402719	regulatory region 402719	635 bp downstream
Rr451078	regulatory region 451078	1363 bp distal
Rr451079	regulatory region 451079	220 bp distal
Rr451080	regulatory region 451080	within coordinates
Tssr102928	transcription start site region 102928	1478 bp downstream
Tssr102929	transcription start site region 102929	1455 bp downstream
Tssr102930	transcription start site region 102930	1364 bp downstream