rs234362953 SNP Detail

Summary

• ID
  rs234362953
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:165505291 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTTGTAGA ACTTATGCAA
  CACAATAGAG TCTATCAATA GAAGGAGGAA TATTGGCTAC TAATGGTTAG AGAAACTGAG
  GCAGAGAGCT ATTAACAGGT GATACTCCCT AAGTGTCAGG GACAGCAATG TTCTCCGGTG
  TCACTCTGGG GAACGTGCAC AGAACTCTGT GTCCCATAGA TGAGGACTTT CACAGTCCCT
  S
  TAGGGAACAG ACAGGGAAAG GGCTCATCTG AAAATGACAG ATCTGGCAGA CTCAGCGCAC
  AGCTGAGGGC TTGTCTGGAA GCCAGGGGCC CCAGGCTTAT GGTGTCATCA GAGGCTAGTG
  AACAGAAGGT AGGAAGCTGA AGACTTTTCC CCGTCAGTCA ATATGTATCT GCTGGATGGC
  TTTACAAACC ATGGCTATTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320087043	CHEV_1_167607853	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234362953					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:165505291 () rs orientation: forward

Symbol	Name	Function Class
Rcsd1	RCSD domain containing 1	within coordinates
Tssr14776	transcription start site region 14776	1100 bp downstream
Tssr14777	transcription start site region 14777	1196 bp downstream