rs234365978 SNP Detail

Summary

• ID
  rs234365978
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:103226920 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACTTAAAT GTCCTTGCTA
  CCTGATAGTT AAGCCCATTG CACATTTGTA AATGGGTGTA AAAACACTTA TAGTAATTCA
  CACTACTAGC TACTGACCAG CCTTTCCCCA ATTTAATCTA TATTTTAATC CATGGAATCA
  TTAAAATCTG AACTAGCCAT GCTTTACCTG AACTTTGACC CACTGGCAAG CTTTGAGGGG
  R
  AAAAGAAACC TGGAGACATA CATGCACTAC AAATTTGAAG TTTTCCTCTT CCCATTCCAG
  GAATCCCCTC CTTGTGCAGA CAATTACCGT GTATCCGAAG CTGCTTTATT CCATAATAAG
  AAAGGTGGGC CTGGATTACC ACAGAAGAGG AAAACTCCTG CAGAGAATGT AGTCAAACGG
  CCTCGAGTAC ACTGAAGTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323160945	CHEV_9_103252051	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234365978					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:103226920 () rs orientation: forward

Symbol	Name	Function Class
Rr202394	regulatory region 202394	606 bp distal
Rr207098	regulatory region 207098	1721 bp distal
Topbp1	topoisomerase (DNA) II binding protein 1	within coordinates
Tssr91191	transcription start site region 91191	1997 bp upstream