rs234392750 SNP Detail

Summary

• ID
  rs234392750
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:164173498 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGCA AGCCAGTAAG CAGTGGTACA
  C
  AGCATCTGCT TCACTTCCTG TCGCT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320605462	CHEV_2_164157314	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234392750					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164173498 () rs orientation: forward

Symbol	Name	Function Class
Svs5	seminal vesicle secretory protein 5	1187 bp upstream
Tssr744	transcription start site region 744	1751 bp upstream
Tssr745	transcription start site region 745	1794 bp upstream
Tssr746	transcription start site region 746	1805 bp upstream
Tssr747	transcription start site region 747	1818 bp downstream
Tssr748	transcription start site region 748	1839 bp upstream
Tssr749	transcription start site region 749	1871 bp upstream
Tssr750	transcription start site region 750	1884 bp upstream
Tssr751	transcription start site region 751	1938 bp upstream
Tssr21562	transcription start site region 21562	1145 bp upstream
Tssr21563	transcription start site region 21563	1162 bp upstream
Tssr21564	transcription start site region 21564	1181 bp upstream
Tssr21565	transcription start site region 21565	1206 bp upstream
Tssr21566	transcription start site region 21566	1216 bp upstream
Tssr21567	transcription start site region 21567	1230 bp upstream
Tssr21568	transcription start site region 21568	1240 bp upstream
Tssr21569	transcription start site region 21569	1717 bp upstream
Tssr21570	transcription start site region 21570	1779 bp upstream
Tssr21571	transcription start site region 21571	1810 bp upstream
Tssr21572	transcription start site region 21572	1827 bp upstream
Tssr21573	transcription start site region 21573	1856 bp upstream
Tssr21574	transcription start site region 21574	1920 bp upstream
Tssr27433	transcription start site region 27433	1775 bp downstream
Tssr27434	transcription start site region 27434	1798 bp downstream
Tssr27435	transcription start site region 27435	1826 bp downstream
Tssr27436	transcription start site region 27436	1845 bp downstream
Tssr27437	transcription start site region 27437	1866 bp downstream
Tssr27438	transcription start site region 27438	1896 bp downstream
Tssr27439	transcription start site region 27439	1910 bp downstream
Tssr27440	transcription start site region 27440	1920 bp downstream
Tssr27441	transcription start site region 27441	1975 bp downstream
Tssr27442	transcription start site region 27442	1983 bp downstream